This issue happened because the respective allowance & deduction have not been ticked for HRDF under the housekeeping.
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To fix this issue:
Go to Housekeeping, Setup, Tables Maintenance.
Go to the Allowance Table or Deduction Table.
For the respective Allowance or Deduction, tick the HRD.
Click OK.
Go to 2nd Half Payroll.
Click Process Pay.
